{
  "_id": "6ad327c86814ce853b6582dd",
  "Package": "QGglmm",
  "Type": "Package",
  "Title": "Estimate Quantitative Genetics Parameters from Generalised\nLinear Mixed Models",
  "Version": "0.8.0",
  "Date": "2025-01-20",
  "Authors@R": "person(given = \"Pierre\",\nfamily = \"de Villemereuil\",\nrole = c(\"aut\", \"cre\"),\nemail = \"pierre.de-villemereuil@mnhn.fr\")",
  "BugReports": "https://github.com/devillemereuil/qgglmm/issues",
  "Description": "Compute various quantitative genetics parameters from a\nGeneralised Linear Mixed Model (GLMM) estimates. Especially, it\nyields the observed phenotypic mean, phenotypic variance and\nadditive genetic variance.",
  "License": "GPL-2",
  "Config/pak/sysreqs": "make",
  "Repository": "https://devillemereuil.r-universe.dev",
  "Date/Publication": "2025-01-20 16:33:31 UTC",
  "RemoteUrl": "https://github.com/devillemereuil/qgglmm",
  "RemoteRef": "HEAD",
  "RemoteSha": "4baf97450f7854c10d5402f20c3a0e6a36325efe",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-10-17 07:43:57 UTC",
    "User": "root"
  },
  "Author": "Pierre de Villemereuil [aut, cre]",
  "Maintainer": "Pierre de Villemereuil <pierre.de-villemereuil@mnhn.fr>",
  "_user": "devillemereuil",
  "_type": "src",
  "_file": "QGglmm_0.8.0.tar.gz",
  "_fileid": "https://r2.ropensci.org/6a752698a2dd61c6013c03e262b7e12553df55a2fea4aac6ee02c1ce18746279",
  "_filesize": 1193658,
  "_sha256": "6a752698a2dd61c6013c03e262b7e12553df55a2fea4aac6ee02c1ce18746279",
  "_expires": "2027-01-25T07:46:14.000Z",
  "_created": "2026-10-17T07:43:57.000Z",
  "_published": "2026-10-17T07:46:16.556Z",
  "_buildurl": "https://github.com/r-universe/devillemereuil/actions/runs/39014542244",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_jobs": [
    {
      "job": 117344393800,
      "time": 100,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "12094222145"
    },
    {
      "job": 117344393926,
      "time": 99,
      "config": "linux-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "12094272065"
    },
    {
      "job": 117344393845,
      "time": 80,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "12094103892"
    },
    {
      "job": 117344393791,
      "time": 85,
      "config": "macos-release-arm64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "12093754991"
    },
    {
      "job": 117343858983,
      "time": 173,
      "config": "source",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "12093734984"
    },
    {
      "job": 117344393826,
      "time": 86,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "12093779687"
    },
    {
      "job": 117344393857,
      "time": 74,
      "config": "windows-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "12094645634"
    },
    {
      "job": 117344393795,
      "time": 63,
      "config": "windows-oldrel-x86_64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "12093633838"
    },
    {
      "job": 117344393837,
      "time": 69,
      "config": "windows-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "12094710048"
    }
  ],
  "_upstream": "https://github.com/devillemereuil/qgglmm",
  "_commit": {
    "id": "4baf97450f7854c10d5402f20c3a0e6a36325efe",
    "author": "Pierre de Villemereuil <pierre.devillemereuil@ephe.psl.eu>",
    "committer": "Pierre de Villemereuil <pierre.devillemereuil@ephe.psl.eu>",
    "message": "Use new \"Authors@R\" field in DESCRIPTION for CRAN incoming\n",
    "time": 1737390811
  },
  "_maintainer": {
    "name": "Pierre de Villemereuil",
    "email": "pierre.de-villemereuil@mnhn.fr",
    "login": "devillemereuil",
    "description": "",
    "uuid": 8666238
  },
  "_distro": "resolute",
  "_registered": true,
  "_dependencies": [
    {
      "package": "cubature",
      "version": ">= 1.4",
      "role": "Imports"
    }
  ],
  "_owner": "devillemereuil",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [],
  "_tags": [],
  "_stars": 16,
  "_contributors": [
    {
      "user": "devillemereuil",
      "count": 27,
      "uuid": 8666238
    },
    {
      "user": "ellisztamas",
      "count": 1,
      "uuid": 19650342
    }
  ],
  "_userbio": {
    "uuid": 8666238,
    "type": "user",
    "name": "devillemereuil",
    "followers": 31
  },
  "_downloads": {
    "count": 323,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/QGglmm"
  },
  "_mentions": 10,
  "_devurl": "https://github.com/devillemereuil/qgglmm",
  "_searchresults": 44,
  "_rbuild": "4.6.1",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/manual.pdf",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/QGglmm.html",
    "extra/readme.html",
    "extra/readme.md"
  ],
  "_homeurl": "https://github.com/devillemereuil/qgglmm",
  "_realowner": "devillemereuil",
  "_cranurl": true,
  "_releases": [
    {
      "version": "0.4",
      "date": "2016-07-13"
    },
    {
      "version": "0.5",
      "date": "2016-09-28"
    },
    {
      "version": "0.5.1",
      "date": "2016-10-03"
    },
    {
      "version": "0.6.0",
      "date": "2017-10-09"
    },
    {
      "version": "0.7.1",
      "date": "2018-06-15"
    },
    {
      "version": "0.7.2",
      "date": "2018-11-12"
    },
    {
      "version": "0.7.3",
      "date": "2019-12-06"
    },
    {
      "version": "0.7.4",
      "date": "2020-01-07"
    },
    {
      "version": "0.8.0",
      "date": "2025-01-20"
    }
  ],
  "_exports": [
    "QGicc",
    "QGlink.funcs",
    "QGmean",
    "QGmvicc",
    "QGmvmean",
    "QGmvparams",
    "QGmvpred",
    "QGmvpsi",
    "QGparams",
    "QGpred",
    "QGpsi",
    "QGvar.dist",
    "QGvar.exp",
    "QGvcov"
  ],
  "_help": [
    {
      "page": "QGglmm-package",
      "title": "Estimate Quantitative Genetics Parameters from Generalised Linear Mixed Models",
      "topics": [
        "QGglmm-package",
        "QGglmm"
      ]
    },
    {
      "page": "QGicc",
      "title": "Intra - Class Correlation coefficients (ICC) on the observed data scale",
      "topics": [
        "QGicc"
      ]
    },
    {
      "page": "QGlink.funcs",
      "title": "List of functions according to a distribution and a link function",
      "topics": [
        "QGlink.funcs"
      ]
    },
    {
      "page": "QGmean",
      "title": "Compute the phenotypic mean on the observed scale",
      "topics": [
        "QGmean"
      ]
    },
    {
      "page": "QGmvicc",
      "title": "Intra - Class Correlation coefficients (ICC) on the observed data scale (multivariate analysis).",
      "topics": [
        "QGmvicc"
      ]
    },
    {
      "page": "QGmvmean",
      "title": "Compute the multivariate phenotypic mean on the observed scale",
      "topics": [
        "QGmvmean"
      ]
    },
    {
      "page": "QGmvparams",
      "title": "Quantitative Genetics parameters from GLMM estimates (multivariate analysis).",
      "topics": [
        "QGmvparams"
      ]
    },
    {
      "page": "QGmvpred",
      "title": "Predict the evolutionary response to selection on the observed scale",
      "topics": [
        "QGmvpred"
      ]
    },
    {
      "page": "QGmvpsi",
      "title": "Compute a multivariate \"Psi\" (used to compute the additive genetic variance on the observed scale).",
      "topics": [
        "QGmvpsi"
      ]
    },
    {
      "page": "QGparams",
      "title": "Quantitative Genetics parameters from GLMM estimates.",
      "topics": [
        "QGparams"
      ]
    },
    {
      "page": "QGpred",
      "title": "Predict the evolutionary response to selection on the observed scale",
      "topics": [
        "QGpred"
      ]
    },
    {
      "page": "QGpsi",
      "title": "Compute \"Psi\" (used to compute the additive genetic variance on the observed scale).",
      "topics": [
        "QGpsi"
      ]
    },
    {
      "page": "QGvar.dist",
      "title": "Compute the distribution variance",
      "topics": [
        "QGvar.dist"
      ]
    },
    {
      "page": "QGvar.exp",
      "title": "Compute the variance of expected values (i.e. the latent values after inverse-link transformation.)",
      "topics": [
        "QGvar.exp"
      ]
    },
    {
      "page": "QGvcov",
      "title": "Compute the phenotypic variance-covariance matrix on the observed / expected scale",
      "topics": [
        "QGvcov"
      ]
    }
  ],
  "_readme": "https://github.com/devillemereuil/qgglmm/raw/HEAD/README.md",
  "_rundeps": [
    "cubature",
    "Rcpp"
  ],
  "_vignettes": [
    {
      "source": "QGglmmHowTo.Rnw",
      "filename": "QGglmmHowTo.pdf",
      "title": "How to use QGglmm",
      "engine": "utils::Sweave",
      "headings": [
        "Summary and aim of the package",
        "Overview of the theory",
        "The framework behind QGglmm",
        "Using QGglmm",
        "Particular cases"
      ],
      "created": "2016-09-28 02:09:28",
      "modified": "2023-01-27 08:45:59",
      "commits": 9
    }
  ],
  "_score": 6.546542663478132,
  "_indexed": true,
  "_nocasepkg": "qgglmm",
  "_universes": [
    "devillemereuil"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.8.0",
      "date": "2026-10-17T07:45:39.000Z",
      "distro": "resolute",
      "commit": "4baf97450f7854c10d5402f20c3a0e6a36325efe",
      "fileid": "https://r2.ropensci.org/b3626757e4d35dfa01012ec7f25dc955741503198d8192ba5ae92720f4ff4192",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/devillemereuil/actions/runs/39014542244"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "0.8.0",
      "date": "2026-10-17T07:45:39.000Z",
      "distro": "resolute",
      "commit": "4baf97450f7854c10d5402f20c3a0e6a36325efe",
      "fileid": "https://r2.ropensci.org/032ca81034bf4d7e9b9ef56c4a65920c1aee51822d28d9af173adcf497e5e4d5",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/devillemereuil/actions/runs/39014542244"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.8.0",
      "date": "2026-10-17T07:45:33.000Z",
      "commit": "4baf97450f7854c10d5402f20c3a0e6a36325efe",
      "fileid": "https://r2.ropensci.org/d2854c3c946585f6d455dc91886e956df5f51759ca289389bcfd591da13c6bd9",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/devillemereuil/actions/runs/39014542244"
    },
    {
      "r": "4.6.1",
      "os": "mac",
      "version": "0.8.0",
      "date": "2026-10-17T07:45:30.000Z",
      "commit": "4baf97450f7854c10d5402f20c3a0e6a36325efe",
      "fileid": "https://r2.ropensci.org/019ab7fd4cdf5b091e5568f19c0e4a60ac662c494cfe40e846c2fc51387418fd",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/devillemereuil/actions/runs/39014542244"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.8.0",
      "date": "2026-10-17T07:45:41.000Z",
      "commit": "4baf97450f7854c10d5402f20c3a0e6a36325efe",
      "fileid": "https://r2.ropensci.org/eec4575d53935914eb3d7cd534e65e8d0e476c9e0b7f00d0ed096f8e333fe266",
      "status": "success",
      "buildurl": "https://github.com/r-universe/devillemereuil/actions/runs/39014542244"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.8.0",
      "date": "2026-10-17T07:45:06.000Z",
      "commit": "4baf97450f7854c10d5402f20c3a0e6a36325efe",
      "fileid": "https://r2.ropensci.org/6ff249c679f5471af2a7d20ac5eb184c44e601456e66749aeeb0a92a85e116b1",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/devillemereuil/actions/runs/39014542244"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.8.0",
      "date": "2026-10-17T07:44:58.000Z",
      "commit": "4baf97450f7854c10d5402f20c3a0e6a36325efe",
      "fileid": "https://r2.ropensci.org/9d8c6b2b12e68918b5acd8504088fbe6cecf19dc470d7acee4024e8f74405c0f",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/devillemereuil/actions/runs/39014542244"
    },
    {
      "r": "4.6.1",
      "os": "win",
      "version": "0.8.0",
      "date": "2026-10-17T07:45:04.000Z",
      "commit": "4baf97450f7854c10d5402f20c3a0e6a36325efe",
      "fileid": "https://r2.ropensci.org/7d9bcaa15d40f55ee6f9e54921b27aff142aaafb77ee9036f1c2e9d1aa9df35c",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/devillemereuil/actions/runs/39014542244"
    }
  ]
}